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Teachers

• Geert van Geest

Authors

• Geert van Geest
• Patricia Palagi

License & copyright

License: CC BY-SA 4.0

Copyright: SIB Swiss Institute of Bioinformatics

Learning outcomes

After this course, you will be able to:

• Understand important aspects of NGS and read alignment for variant analysis
• Perform a read alignment ready for variant analysis
• Perform variant calling according to GATK best practices
• Perform a variant annotation

Learning experiences

This course will consist of lectures, exercises and polls. During exercises, you are free to discuss with other participants. During lectures, focus on the lecture only.

Questions & Answers