GBA1 ‘Lysosomal acid glucosylceramidase’ Turtle
Learning outcomes
After having completed this chapter, you will be able to:
- Get a Turtle file from a UniProt entry
- Import a Turtle file in GraphDB
Material
The exercises below follow the same structure as the music example, with a focus on the GBA1 gene involved in the Gaucher disease.
Let’s look at the GBA1 entry in UniProt:
Some variants of this protein caused the Gaucher disease.
Export a ttl (Turtle) file from UniProt
A Turtle file can be exported directly from a UniProt entry page.
Import a ttl file in GraphDB
Create a new repository
Go to the GraphDB main screen
Create a new repository to work in
Import a ttl file
A Turtle file can be easily imported in GraphDB
Select Upload RDF files, and upload your Turtle file(s)
The GraphDB main page shows statistics about the data in your repository
Next Queries on the GBA1 graph