sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

003

What are the anatomical entities where the APOC1 gene is expressed?

Use at

PREFIX genex: <http://purl.org/genex#>
PREFIX orth: <http://purl.org/net/orth#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>

SELECT DISTINCT ?anat ?anatName WHERE {
    ?seq a orth:Gene ;
        genex:isExpressedIn ?anat ;
        rdfs:label "APOC1" .
    ?anat a genex:AnatomicalEntity ;
        rdfs:label ?anatName .
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?anat"):::projected 
  v3("?anatName"):::projected 
  v1("?seq")
  c6(["genex:AnatomicalEntity"]):::iri 
  c5(["APOC1"]):::literal 
  c2(["orth:Gene"]):::iri 
  v1 --"a"-->  c2
  v1 --"genex:isExpressedIn"-->  v2
  v1 --"rdfs:label"-->  c5
  v2 --"a"-->  c6
  v2 --"rdfs:label"-->  v3