sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

024

Human anatomic entities at young adult developmental stage

Use at

PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX up: <http://purl.uniprot.org/core/>
PREFIX genex: <http://purl.org/genex#>
PREFIX obo: <http://purl.obolibrary.org/obo/>

SELECT DISTINCT ?anatomicalEntity ?stageName {
    ?condition genex:hasAnatomicalEntity ?anatEntity ;
        genex:hasDevelopmentalStage ?stage ;
        obo:RO_0002162/up:commonName ?commonName .
    ?anatEntity rdfs:label ?anatomicalEntity .
    ?stage rdfs:label ?stageName .
    FILTER( LCASE(?commonName) = "human" )
    FILTER( CONTAINS(LCASE(?stageName), "young adult") )
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?anatEntity")
  v6("?anatomicalEntity"):::projected 
  v2("?commonName")
  v3("?condition")
  v5("?stage")
  v1("?stageName"):::projected 
  a1((" "))
  f0[["contains(lower-case(?stageName),'young adult')"]]
  f0 --> v1
  f1[["lower-case(?commonName) = 'human'"]]
  f1 --> v2
  v3 --"genex:hasAnatomicalEntity"-->  v4
  v3 --"genex:hasDevelopmentalStage"-->  v5
  v3 --"obo:RO_0002162"-->  a1
  a1 --"up:commonName"-->  v2
  v4 --"rdfs:label"-->  v6
  v5 --"rdfs:label"-->  v1