A set of SPARQL examples that are used in different SIB resources
Retrieve the identifiers for N,N-dimethyl-beta-alanine in external databases. This crosslinking of external identifiers is the core of MNXref.
PREFIX mnx: <https://rdf.metanetx.org/schema/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
# Retrieve the identifiers for *N,N-dimethyl-beta-alanine* in
# external databases. This crosslinking of external
# identifiers is the core of MNXref.
SELECT ?metabolite ?xref
FROM <https://rdf.metanetx.org/> WHERE {
?metabolite a mnx:CHEM .
?metabolite rdfs:comment 'N-nitrosomethanamine' .
?metabolite mnx:chemXref ?xref
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v1("?metabolite"):::projected
v2("?xref"):::projected
c4(["N-nitrosomethanamine"]):::literal
c2(["mnx:CHEM"]):::iri
v1 --"a"--> c2
v1 --"rdfs:comment"--> c4
v1 --"mnx:chemXref"--> v2