61_Select_all_approved_reactions_using_CHEBI_29985_as_small_molecule_participant

rq turtle/ttl

Select all approved reactions using CHEBI:29985 (L-glutamate) as small molecule participant

Use at

• https://sparql.rhea-db.org/sparql

PREFIX CHEBI: <http://purl.obolibrary.org/obo/CHEBI_>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rh:<http://rdf.rhea-db.org/>
SELECT
  (count(?reaction) as ?reactionCount)
WHERE {
  ?reaction rdfs:subClassOf rh:Reaction .
  ?reaction rh:status rh:Approved .
  ?reaction rh:side ?reactionSide .
  ?reactionSide rh:contains ?smallMolecule .
  ?smallMolecule rdfs:subClassOf+ CHEBI:29985
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?reaction"):::projected 
  v4("?reactionCount")
  v2("?reactionSide")
  v3("?smallMolecule")
  c4(["rh:Approved"]):::iri 
  c7(["CHEBI:29985"]):::iri 
  c2(["rh:Reaction"]):::iri 
  v1 --"rdfs:subClassOf"-->  c2
  v1 --"rh:status"-->  c4
  v1 --"rh:side"-->  v2
  v2 --"rh:contains"-->  v3
  v3 --"rdfs:subClassOf"-->  c7
  bind1[/"count(?reaction)"/]
  v1 --o bind1
  bind1 --as--o v4