sparql-examples

A set of SPARQL examples that are used in different SIB resources

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74_Select_children_of_CHEBI_35179_in_the_ChEBI_hierarchy_used_in_Rhea_reactions_and_show_the_reactions

rq turtle/ttl

Select children of CHEBI:35179 (a 2-oxo carboxylate) in the ChEBI hierarchy (using rdfs:subClassOf) used in Rhea reaction(s), and show the reaction(s)

Use at

PREFIX CHEBI: <http://purl.obolibrary.org/obo/CHEBI_>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rh:<http://rdf.rhea-db.org/>
SELECT
  ?chebi
  ?compoundName
  ?reaction
  ?reactionEquation
WHERE {
  ?reaction rdfs:subClassOf rh:Reaction .
  ?reaction rh:status rh:Approved .
  ?reaction rh:equation ?reactionEquation .
  ?reaction rh:side ?reactionSide .
  ?reactionSide rh:contains ?participant .
  ?participant rh:compound ?compound .
  ?compound rh:name ?compoundName .
  ?compound rh:chebi ?chebi .
  ?chebi rdfs:subClassOf CHEBI:35179 .
}
ORDER BY ?chebi
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?chebi"):::projected 
  v6("?compound")
  v7("?compoundName"):::projected 
  v5("?participant")
  v2("?reaction"):::projected 
  v3("?reactionEquation"):::projected 
  v4("?reactionSide")
  c11(["CHEBI:35179"]):::iri 
  c4(["rh:Approved"]):::iri 
  c2(["rh:Reaction"]):::iri 
  v2 --"rdfs:subClassOf"-->  c2
  v2 --"rh:status"-->  c4
  v2 --"rh:equation"-->  v3
  v2 --"rh:side"-->  v4
  v4 --"rh:contains"-->  v5
  v5 --"rh:compound"-->  v6
  v6 --"rh:name"-->  v7
  v6 --"rh:chebi"-->  v1
  v1 --"rdfs:subClassOf"-->  c11