95_Get_uniprot_name_of_a_given_chebi_compound

rq turtle/ttl

Get uniprot name of a given chebi compound

Use at

• https://sparql.rhea-db.org/sparql

PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX rh:<http://rdf.rhea-db.org/>
PREFIX CHEBI:<http://purl.obolibrary.org/obo/CHEBI_>
PREFIX oboInOwl:<http://www.geneontology.org/formats/oboInOwl#>
PREFIX owl:<http://www.w3.org/2002/07/owl#>
PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>

SELECT
  ?chebi
  ?chebiName
  ?chebiUniprotName
WHERE {
  BIND(CHEBI:57416 AS ?chebi)
  ?chebi rdfs:label ?chebiName .
  ?chebi oboInOwl:hasRelatedSynonym ?chebiUniprotName .
  ?axiom a owl:Axiom .
  ?axiom owl:annotatedSource ?chebi .
  ?axiom owl:annotatedProperty oboInOwl:hasRelatedSynonym .
  ?axiom owl:annotatedTarget ?chebiUniprotName .
  ?axiom oboInOwl:hasDbXref ?dbXref .
  FILTER (?dbXref="UniProt")
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v5("?axiom")
  v2("?chebi"):::projected 
  v3("?chebiName"):::projected 
  v4("?chebiUniprotName"):::projected 
  v1("?dbXref")
  c3(["oboInOwl:hasRelatedSynonym"]):::iri 
  c5(["owl:Axiom"]):::iri 
  f0[["?dbXref = 'UniProt'"]]
  f0 --> v1
  bind1[/"'CHEBI:57416'"/]
  bind1 --as--o v2
  v2 --"rdfs:label"-->  v3
  v2 -->c3--> v4
  v5 --"a"-->  c5
  v5 --"owl:annotatedSource"-->  v2
  v5 --"owl:annotatedProperty"-->  c3
  v5 --"owl:annotatedTarget"-->  v4
  v5 --"oboInOwl:hasDbXref"-->  v1