sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

106_uniprot_reviewed_or_not

List all UniProtKB proteins and if they are reviewed (Swiss-Prot) or unreviewed (TrEMBL)

Use at

PREFIX up: <http://purl.uniprot.org/core/>

SELECT
  ?protein
  ?reviewed
WHERE {
  ?protein a up:Protein . 
  ?protein up:reviewed ?reviewed . 
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?protein"):::projected 
  v2("?reviewed"):::projected 
  c2(["up:Protein"]):::iri 
  v1 --"a"-->  c2
  v1 --"up:reviewed"-->  v2