114_Number_of_EC_numbers_described_at_protein_domain_and_component_levels

rq turtle/ttl

Number of EC numbers described at protein, domain and component levels

Use at

• https://sparql.uniprot.org/sparql

PREFIX up:<http://purl.uniprot.org/core/>
PREFIX ec:<http://purl.uniprot.org/enzyme/>
PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>

SELECT 
  (count(distinct ?protein) as ?proteinCount)
WHERE
{
  ?protein up:reviewed true .
  OPTIONAL{?protein up:enzyme ?ecNumber}
  OPTIONAL{?protein up:domain/up:enzyme ?ecNumber}
  OPTIONAL{?protein up:component/up:enzyme ?ecNumber}
  FILTER (BOUND(?ecNumber))
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?ecNumber")
  v2("?protein"):::projected 
  v3("?proteinCount")
  a1((" "))
  a2((" "))
  c2(["true^^xsd:boolean"]):::literal 
  f0[["bound(?ecNumber)"]]
  f0 --> v1
  v2 --"up:reviewed"-->  c2
  subgraph optional0["(optional)"]
  style optional0 fill:#bbf,stroke-dasharray: 5 5;
    v2 -."up:enzyme".->  v1
  end
  subgraph optional1["(optional)"]
  style optional1 fill:#bbf,stroke-dasharray: 5 5;
    v2 -."up:domain".->  a1
    a1 --"up:enzyme"-->  v1
  end
  subgraph optional2["(optional)"]
  style optional2 fill:#bbf,stroke-dasharray: 5 5;
    v2 -."up:component".->  a2
    a2 --"up:enzyme"-->  v1
  end
  bind2[/"count(?protein)"/]
  v2 --o bind2
  bind2 --as--o v3