202_uniparc_sequence_cluster_membership

UniParc
UniRef
cluster

Find which UniRef clusters a specific sequence (identified by its UniParc entry) is a member of, using up:memberOf on the sequence itself. Distinct from the existing UniRef common-taxon example (#162), which starts from the cluster and asks for its up:member sequences — this starts from the sequence and asks which clusters it belongs to

Use at

https://sparql.uniprot.org/sparql/

PREFIX up: <http://purl.uniprot.org/core/>

SELECT
  ?uniparc
  ?cluster
WHERE {
  ?uniparc up:sequenceFor <http://purl.uniprot.org/uniprot/P04637> ;
    up:memberOf ?cluster .
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?cluster"):::projected 
  v1("?uniparc"):::projected 
  c2([http://purl.uniprot.org/uniprot/P04637]):::iri 
  v1 --"up:sequenceFor"-->  c2
  v1 --"up:memberOf"-->  v2