@prefix ex: <https://sparql.uniprot.org/.well-known/sparql-examples/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix schema: <https://schema.org/> .
@prefix sh: <http://www.w3.org/ns/shacl#> .

ex:205_taxon_abbreviated_lineage_flag a sh:SPARQLExecutable,
        sh:SPARQLSelectExecutable ;
    rdfs:comment "For human (taxon 9606), list every ancestor taxon in its lineage and whether that taxon is shown in UniProt's abbreviated lineage view (up:partOfLineage), as opposed to the full, non-abbreviated set of ancestors. Pairs with #183: since UniProt's taxonomy is pre-flattened, a single-hop rdfs:subClassOf already reaches every ancestor at any depth"@en ;
    sh:prefixes _:sparql_examples_prefixes ;
    sh:select """PREFIX up: <http://purl.uniprot.org/core/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX taxon: <http://purl.uniprot.org/taxonomy/>

SELECT
  ?ancestor
  ?ancestorName
  ?partOfLineage
WHERE {
  taxon:9606 rdfs:subClassOf ?ancestor .
  ?ancestor up:scientificName ?ancestorName .
  OPTIONAL { ?ancestor up:partOfLineage ?partOfLineage }
}
ORDER BY DESC(?partOfLineage)""" ;
    schema:keywords "taxonomy" , "lineage" , "classification" ;
    schema:target <https://sparql.uniprot.org/sparql/> .