211_structure_resolution

structure
PDB
resolution

Find the highest-resolution (lowest Angstrom value) experimentally determined structures cross-referenced from reviewed proteins, using up:resolution recorded on the PDB structure resource

Use at

https://sparql.uniprot.org/sparql/

PREFIX up: <http://purl.uniprot.org/core/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>

SELECT
  ?protein
  ?structure
  ?resolution
WHERE {
  ?protein a up:Protein ;
    up:reviewed true ;
    rdfs:seeAlso ?structure .
  ?structure a up:Structure_Resource ;
    up:resolution ?resolution .
}
ORDER BY ?resolution

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?protein"):::projected 
  v1("?resolution"):::projected 
  v3("?structure"):::projected 
  c6(["up:Structure_Resource"]):::iri 
  c4(["true^^xsd:boolean"]):::literal 
  c2(["up:Protein"]):::iri 
  v2 --"a"-->  c2
  v2 --"up:reviewed"-->  c4
  v2 --"rdfs:seeAlso"-->  v3
  v3 --"a"-->  c6
  v3 --"up:resolution"-->  v1