sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

23

Number of reviewed entries (UniProtKB/Swiss-Prot) that are related to kinase activity

Use at

PREFIX GO: <http://purl.obolibrary.org/obo/GO_>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX taxon: <http://purl.uniprot.org/taxonomy/>
PREFIX up: <http://purl.uniprot.org/core/>

SELECT
    (COUNT(DISTINCT(?protein)) AS ?pc)
WHERE
{   
    ?protein rdf:type up:Protein ;
        up:reviewed true  ;
        up:organism taxon:9606 ;
        up:classifiedWith|(up:classifiedWith/rdfs:subClassOf) GO:0016301 .
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?pc")
  v1("?protein"):::projected 
  a1((" "))
  c8(["GO:0016301"]):::iri 
  c4(["true^^xsd:boolean"]):::literal 
  c2(["up:Protein"]):::iri 
  c6(["taxon:9606"]):::iri 
  v1 --"a"-->  c2
  v1 --"up:reviewed"-->  c4
  v1 --"up:organism"-->  c6
  subgraph union0[" Union "]
  subgraph union0l[" "]
    style union0l fill:#abf,stroke-dasharray: 3 3;
    v1 --"up:classifiedWith"-->  a1
    a1 --"rdfs:subClassOf"-->  c8
  end
  subgraph union0r[" "]
    style union0r fill:#abf,stroke-dasharray: 3 3;
    v1 --"up:classifiedWith"-->  c8
  end
  union0r <== or ==> union0l
  end
  bind1[/"count(?protein)"/]
  v1 --o bind1
  bind1 --as--o v2