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Map a selection of UniProtKB accession numbers (ACs) to HGNC identifiers and symbols

Use at

• https://sparql.uniprot.org/sparql/

PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX uniprotkb: <http://purl.uniprot.org/uniprot/>
PREFIX up: <http://purl.uniprot.org/core/>

SELECT
  ?uniprot
  ?hgnc
  ?hgncSymbol
WHERE
{
  # A space separated list of UniProt primary accessions.
  VALUES (?acc) {('P05067') ('P00750')}
  BIND(iri(concat(str(uniprotkb:), ?acc)) AS ?uniprot)
  ?uniprot rdfs:seeAlso ?hgnc .
  ?hgnc up:database <http://purl.uniprot.org/database/HGNC> ;
       rdfs:comment ?hgncSymbol .
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?acc")
  v3("?hgnc"):::projected 
  v4("?hgncSymbol"):::projected 
  v2("?uniprot"):::projected 
  c3([http://purl.uniprot.org/database/HGNC]):::iri 
  bind0[/VALUES ?acc/]
  bind0-->v1
  bind00(["P05067"])
  bind00 --> bind0
  bind01(["P00750"])
  bind01 --> bind0
  bind1[/"concat(str('uniprotkb:'),?acc)"/]
  v1 --o bind1
  bind1 --as--o v2
  v2 --"rdfs:seeAlso"-->  v3
  v3 --"up:database"-->  c3
  v3 --"rdfs:comment"-->  v4