A set of SPARQL examples that are used in different SIB resources
Find diseases that are thought to be related to enzymes
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX up: <http://purl.uniprot.org/core/>
SELECT
?disease ?diseaseLabel
WHERE {
?protein up:enzyme|up:annotation/up:catalyticActivity/up:enzymeClass ?enzyme ;
up:annotation ?diseaseAnnotation .
?diseaseAnnotation a up:Disease_Annotation ;
up:disease ?disease .
?disease skos:prefLabel ?diseaseLabel .
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v4("?disease"):::projected
v3("?diseaseAnnotation")
v5("?diseaseLabel"):::projected
v2("?enzyme")
v1("?protein")
a1((" "))
a2((" "))
c6(["up:Disease_Annotation"]):::iri
subgraph union0[" Union "]
subgraph union0l[" "]
style union0l fill:#abf,stroke-dasharray: 3 3;
v1 --"up:annotation"--> a1
a1 --"up:catalyticActivity"--> a2
a2 --"up:enzymeClass"--> v2
end
subgraph union0r[" "]
style union0r fill:#abf,stroke-dasharray: 3 3;
v1 --"up:enzyme"--> v2
end
union0r <== or ==> union0l
end
v1 --"up:annotation"--> v3
v3 --"a"--> c6
v3 --"up:disease"--> v4
v4 --"skos:prefLabel"--> v5