drosophila_proteins_derived_from_at_least_two_mRNAs

Find Drosophila enzymes, that depend on more than one transcript (requires cross-references to Ensembl family of resources).

Use at

• https://sparql.uniprot.org/sparql/

PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX taxon: <http://purl.uniprot.org/taxonomy/>
PREFIX up: <http://purl.uniprot.org/core/>

SELECT
  ?protein
WHERE {
  ?protein up:organism taxon:7227 ;
    a up:Protein ;
    up:reviewed true ;
    rdfs:seeAlso ?transcript .
  {
    ?protein up:annotation/a up:Catalytic_Activity_Annotation ;
  } UNION {
    ?protein up:enzyme ?enzyme .
  }
  ?transcript  a up:Transcript_Resource .
} GROUP BY ?protein HAVING(COUNT(?transcript) >= 2)

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?_anon_aaf95e3c346c4c97af230d5bcfeba8ab6526")
  v3("?enzyme")
  v1("?protein"):::projected 
  v2("?transcript")
  a2((" "))
  a1((" "))
  c3(["taxon:7227"]):::iri 
  c12(["up:Transcript_Resource"]):::iri 
  c7(["true^^xsd:boolean"]):::literal 
  c10(["up:Catalytic_Activity_Annotation"]):::iri 
  c5(["up:Protein"]):::iri 
  f0[[" >= '2^^xsd:integer'"]]
  f0 --> a1
  v1 --"up:organism"-->  c3
  v1 --"a"-->  c5
  v1 --"up:reviewed"-->  c7
  v1 --"rdfs:seeAlso"-->  v2
  subgraph union0[" Union "]
  subgraph union0l[" "]
    style union0l fill:#abf,stroke-dasharray: 3 3;
    v1 --"up:enzyme"-->  v3
  end
  subgraph union0r[" "]
    style union0r fill:#abf,stroke-dasharray: 3 3;
    v1 --"up:annotation"-->  a2
    a2 --"a"-->  c10
  end
  union0r <== or ==> union0l
  end
  v2 --"a"-->  c12
  bind2[/"count(?transcript)"/]
  v2 --o bind2
  bind2 --as--o v4