A set of SPARQL examples that are used in different SIB resources
Select all cross-references to external databases of the category '3D structure databases' of UniProtKB entries that are classified with the keyword 'Acetoin biosynthesis (KW-0005)'
PREFIX keywords: <http://purl.uniprot.org/keywords/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX up: <http://purl.uniprot.org/core/>
SELECT DISTINCT ?link
WHERE
{
?protein a up:Protein .
?protein up:classifiedWith keywords:5 .
?protein rdfs:seeAlso ?link .
?link up:database ?db .
?db up:category '3D structure databases'
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v3("?db")
v2("?link"):::projected
v1("?protein")
c8(["3D structure databases"]):::literal
c4(["keywords:5"]):::iri
c2(["up:Protein"]):::iri
v1 --"a"--> c2
v1 --"up:classifiedWith"--> c4
v1 --"rdfs:seeAlso"--> v2
v2 --"up:database"--> v3
v3 --"up:category"--> c8