97_uniprot_encoding_gene_org_name

List UniProtKB proteins with their associated gene and the gene's ORF label

Use at

• https://sparql.uniprot.org/sparql/

PREFIX up: <http://purl.uniprot.org/core/>

SELECT
  ?gene 
  ?orfName
WHERE {
  ?protein a up:Protein ;
           up:encodedBy ?gene .
  ?gene up:orfName ?orfName .
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?gene"):::projected 
  v3("?orfName"):::projected 
  v1("?protein")
  c2(["up:Protein"]):::iri 
  v1 --"a"-->  c2
  v1 --"up:encodedBy"-->  v2
  v2 --"up:orfName"-->  v3