sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_00012

Proteins that interact with protein RBM17 and that are involved in splicing

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot: <http://nextprot.org/rdf/entry/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 nextprot:NX_Q96I25 :isoform / :interaction / :interactant ?entry.
 ?entry :isoform / :uniprotKeyword / :term nextprot_cv:KW-0508
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  a1((" "))
  a2((" "))
  a3((" "))
  a4((" "))
  c7([":terminology/KW-0508"]):::iri 
  c1([":entry/NX_Q96I25"]):::iri 
  c1 --":isoform"-->  a1
  a1 --":interaction"-->  a2
  a2 --":interactant"-->  v1
  v1 --":isoform"-->  a3
  a3 --":uniprotKeyword"-->  a4
  a4 --":term"-->  c7