A set of SPARQL examples that are used in different SIB resources
Proteins that have a protein kinase domain but lack protein kinase activity
PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>
SELECT DISTINCT ?entry WHERE {
?entry :isoform ?iso.
?iso :region /:term nextprot_cv:DO-00529.
filter not exists { ?iso :enzymeClassification / :term /:childOf nextprot_cv:2_7_-_- }
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?entry"):::projected
v1("?iso")
a3((" "))
a1((" "))
a2((" "))
c4([":terminology/2_7_-_-"]):::iri
c7([":terminology/DO-00529"]):::iri
f0[["not "]]
subgraph f0e0["Exists Clause"]
e0v1 --":enzymeClassification"--> e0a1
e0a1 --":term"--> e0a2
e0a2 --":childOf"--> e0c4
e0v1("?iso"):::projected
e0a1((" ")):::projected
e0a2((" ")):::projected
e0c4([":terminology/2_7_-_-"]):::iri
end
f0--EXISTS--> f0e0
f0 --> v1
f0 --> c1
f0 --> a1
f0 --> c2
f0 --> a2
f0 --> c3
f0 --> c4
v1 --":enzymeClassification"--> a1
a1 --":term"--> a2
a2 --":childOf"--> c4
v2 --":isoform"--> v1
v1 --":region"--> a3
a3 --":term"--> c7