sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_00024

Proteins with more than 10 reported interactions (of 'gold' quality)

Use at

PREFIX : <http://nextprot.org/rdf/>

SELECT DISTINCT ?entry WHERE {
 ?entry :isoform/:binaryInteraction ?interaction.
 ?interaction :interactant ?interactant; :quality :GOLD.
 ?interactant a :Entry.
} group by ?entry having (count(distinct ?interactant) > 10)
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?_anon_aaf95e3c346c4c97af230d5bcfeba8ab1243")
  v1("?entry"):::projected 
  v3("?interactant")
  v2("?interaction")
  a2((" "))
  a1((" "))
  c6([":GOLD"]):::iri 
  c8([":Entry"]):::iri 
  f0[[" > '10^^xsd:integer'"]]
  f0 --> a1
  v1 --":isoform"-->  a2
  a2 --":binaryInteraction"-->  v2
  v2 --":interactant"-->  v3
  v2 --":quality"-->  c6
  v3 --"a"-->  c8
  bind2[/"count(?interactant)"/]
  v3 --o bind2
  bind2 --as--o v4