sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_00030

Proteins whose gene is located in chromosome 2 that belongs to families with at least 5 members in the human proteome

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>

select ?entry WHERE {
 ?entry :familyName / :term/^:term/^:familyName ?member.
 ?entry :gene / :chromosome "2"^^xsd:string .
} group by ?entry having ( count(distinct ?member) >= 5 )
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v3("?_anon_aaf95e3c346c4c97af230d5bcfeba8ab737")
  v1("?entry"):::projected 
  v2("?member")
  a2((" "))
  a3((" "))
  a4((" "))
  a5((" "))
  a1((" "))
  c6(["2"]):::literal 
  f0[[" >= '5^^xsd:integer'"]]
  f0 --> a1
  v1 --":familyName"-->  a2
  a2 --":term"-->  a3
  a4 --":term"-->  a3
  v2 --":familyName"-->  a4
  v1 --":gene"-->  a5
  a5 --":chromosome"-->  c6
  bind2[/"count(?member)"/]
  v2 --o bind2
  bind2 --as--o v3