neXtProt/NXQ_00033

Proteins with at least one phosphotyrosine but no phosphoserine or phosphothreonine

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 select ?entry ?iso (count(?ptm) as ?ptmCnt) WHERE {
 ?entry :isoform ?iso.
 ?iso :modifiedResidue ?ptm.
 ?ptm :term nextprot_cv:PTM-0255 #phosphotyrosine.
 filter (
 not exists { ?iso :modifiedResidue / :term nextprot_cv:PTM-0253. } #phosphoserine
 &&
 not exists { ?iso :modifiedResidue / :term nextprot_cv:PTM-0254. } #phosphothreonine
 )
 } group by ?entry ?iso having ( count(?ptm) >= 1 )
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?_anon_aaf95e3c346c4c97af230d5bcfeba8ab1312")
  v2("?entry"):::projected 
  v1("?iso")
  v3("?ptm")
  v5("?ptmCnt")
  a2((" "))
  a3((" "))
  a1((" "))
  c7([":terminology/PTM-0255"]):::iri 
  c4([":terminology/PTM-0253"]):::iri 
  c5([":terminology/PTM-0254"]):::iri 
  f0[[" >= '1^^xsd:integer'"]]
  f0 --> a1
  f1[["not  not  "]]
  subgraph f1e0["Exists Clause"]
    e0v1 --":modifiedResidue"-->  e0a1
    e0a1 --":term"-->  e0c3
    e0v1("?iso"):::projected 
    e0a1((" ")):::projected 
    e0c3([":terminology/PTM-0253"]):::iri 
  end
  f1--EXISTS--> f1e0
  subgraph f1e1["Exists Clause"]
    e1v1 --":modifiedResidue"-->  e1a1
    e1a1 --":term"-->  e1c3
    e1v1("?iso"):::projected 
    e1a1((" ")):::projected 
    e1c3([":terminology/PTM-0254"]):::iri 
  end
  f1--EXISTS--> f1e1
  f1 --> v1
  f1 --> c2
  f1 --> a2
  f1 --> c3
  f1 --> c4
  f1 --> a3
  f1 --> c5
  v1 --":modifiedResidue"-->  a2
  a2 --":term"-->  c4
  v1 --":modifiedResidue"-->  a3
  a3 --":term"-->  c5
  v2 --":isoform"-->  v1
  v1 --":modifiedResidue"-->  v3
  v3 --":term"-->  c7
  bind4[/"count(?ptm)"/]
  v3 --o bind4
  bind4 --as--o v4
  bind5[/"count(?ptm)"/]
  v3 --o bind5
  bind5 --as--o v5