neXtProt/NXQ_00037

Proteins that bind RNA but do not contain a RRM domain

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 ?entry :isoform ?iso .
 ?iso :uniprotKeyword /:term nextprot_cv:KW-0694. #RNA-binding
 filter not exists {?iso :region/:term nextprot_cv:DO-00581} #RRM
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v1("?iso")
  a2((" "))
  a1((" "))
  c3([":terminology/DO-00581"]):::iri 
  c6([":terminology/KW-0694"]):::iri 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":region"-->  e0a1
    e0a1 --":term"-->  e0c3
    e0v1("?iso"):::projected 
    e0a1((" ")):::projected 
    e0c3([":terminology/DO-00581"]):::iri 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> a1
  f0 --> c2
  f0 --> c3
  v1 --":region"-->  a1
  a1 --":term"-->  c3
  v2 --":isoform"-->  v1
  v1 --":uniprotKeyword"-->  a2
  a2 --":term"-->  c6