A set of SPARQL examples that are used in different SIB resources
Proteins that are enzymes and with at least one mutagenesis site that decrease or abolish activity
PREFIX : <http://nextprot.org/rdf/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
SELECT DISTINCT ?entry WHERE {
?nextprot:isoform ?iso.
?iso :enzymeClassification ?_ .
?iso :mutagenesis/rdfs:comment ?comment
filter regex(?comment, '(decrease|abolish).*activity','i')
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v4("?_")
v1("?comment")
v3("?iso")
v2("?nextprot")
a1((" "))
f0[["regex(?comment,'(decrease|abolish).*activity','i')"]]
f0 --> v1
v2 --":isoform"--> v3
v3 --":enzymeClassification"--> v4
v3 --":mutagenesis"--> a1
a1 --"rdfs:comment"--> v1