NXQ_00076

rq turtle/ttl

• antibody
• dataset
• proteomics
• subcellular location
• tutorial

Proteins which are located in mitochondrion and have at least one HPA antibody and exist in at least one proteome identification sets

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 values ?mitoloc {nextprot_cv:SL-0173 nextprot_cv:GO_0005739} # SL and GO values for mitochondrion

 ?entry :isoform ?iso.
 ?iso :cellularComponent ?loc .
 ?loc :term /:childOf ?mitoloc .
 filter not exists { ?loc :negativeEvidence ?negev. } # No negative localization evidence
 ?iso :antibodyMapping ?abmap.
 ?iso :peptideMapping ?pepmap.
}