A set of SPARQL examples that are used in different SIB resources
Proteins with at least one 3D structure and that are phosphorylated
PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>
SELECT DISTINCT ?entry WHERE {
?entry :isoform ?iso.
?iso :uniprotKeyword / :term nextprot_cv:KW-0597. # Phosphoprotein
?iso :pdbMapping ?map.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v1("?entry"):::projected
v2("?iso")
v3("?map")
a1((" "))
c4([":terminology/KW-0597"]):::iri
v1 --":isoform"--> v2
v2 --":uniprotKeyword"--> a1
a1 --":term"--> c4
v2 --":pdbMapping"--> v3