neXtProt/NXQ_00105

Proteins with at least one cross-reference to SMR (Swiss Model Repository) but no cross-references to PDB

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX db: <http://nextprot.org/rdf/db/>

SELECT DISTINCT ?entry WHERE {
 ?entry a :Entry.
 ?entry :reference / :provenance db:SMR.
 filter not exists { ?entry :reference / :provenance db:PDB }
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  a2((" "))
  a1((" "))
  c5([":Entry"]):::iri 
  c6([":db/SMR"]):::iri 
  c3([":db/PDB"]):::iri 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":reference"-->  e0a1
    e0a1 --":provenance"-->  e0c3
    e0v1("?entry"):::projected 
    e0a1((" ")):::projected 
    e0c3([":db/PDB"]):::iri 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> a1
  f0 --> c2
  f0 --> c3
  v1 --":reference"-->  a1
  a1 --":provenance"-->  c3
  v1 --"a"-->  c5
  v1 --":reference"-->  a2
  a2 --":provenance"-->  c6