neXtProt/NXQ_00118

Proteins with at least one somatic variant

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX source: <http://nextprot.org/rdf/source/>

SELECT DISTINCT ?entry WHERE {
 ?entry :isoform ?iso.
 ?iso :variant ?var.
 {
 ?var rdfs:comment ?comment.
 filter (contains (?comment,'somatic'))
 }
 union
 {
 ?var :evidence ?ev.
 ?ev :assignedBy source:Cosmic.
 }
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?comment")
  v1("?entry"):::projected 
  v5("?ev")
  v2("?iso")
  v3("?var")
  c7([":source/Cosmic"]):::iri 
  v1 --":isoform"-->  v2
  v2 --":variant"-->  v3
  subgraph union0[" Union "]
  subgraph union0l[" "]
    style union0l fill:#abf,stroke-dasharray: 3 3;
    v3 --":evidence"-->  v5
    v5 --":assignedBy"-->  c7
  end
  subgraph union0r[" "]
    style union0r fill:#abf,stroke-dasharray: 3 3;
    f0[["contains(?comment,'somatic')"]]
    f0 --> v4
    v3 --"rdfs:comment"-->  v4
  end
  union0r <== or ==> union0l
  end