neXtProt/NXQ_00216

Phosphorylation sites from PeptideAtlas Phosphoproteome

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX source: <http://nextprot.org/rdf/source/>

SELECT DISTINCT (sample(?iso) as ?isospl) (sample(?pos) as ?posspl) WHERE {
 ?entry :isoform ?iso .
 ?iso :ptm ?ptm.
 ?ptm :entryAnnotationId ?ptmid; :start ?pos .
 ?ptm :evidence / :assignedBy source:PeptideAtlas_human_phosphoproteome .
}
group by ?ptmid
order by ?isospl ?posspl

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v3("?entry")
  v4("?iso"):::projected 
  v8("?isospl")
  v7("?pos"):::projected 
  v8("?posspl")
  v5("?ptm")
  v6("?ptmid")
  a1((" "))
  c7([":source/PeptideAtlas_human_phosphoproteome"]):::iri 
  v3 --":isoform"-->  v4
  v4 --":ptm"-->  v5
  v5 --":entryAnnotationId"-->  v6
  v5 --":start"-->  v7
  v5 --":evidence"-->  a1
  a1 --":assignedBy"-->  c7
  bind2[/"sample(?iso)"/]
  v4 --o bind2
  bind2 --as--o v8
  bind3[/"sample(?pos)"/]
  v7 --o bind3
  bind3 --as--o v8