neXtProt/NXQ_00236

Proteins with subcellular location gold and list of all these locations

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>

SELECT DISTINCT ?entry (group_concat(distinct str(?loclab); SEPARATOR = ",") as ?locs) WHERE {
 ?entry :isoform ?iso.
 ?iso :cellularComponent ?locannot .
 ?locannot :term ?locterm .
 ?locterm rdfs:label ?loclab .
 ?locannot :evidence ?locev .
 ?locev :quality :GOLD .
 filter not exists {?locannot :negativeEvidence ?locev .}
}
GROUP BY ?entry

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v3("?entry"):::projected 
  v4("?iso")
  v1("?locannot")
  v2("?locev")
  v6("?loclab"):::projected 
  v7("?locs")
  v5("?locterm")
  c8([":GOLD"]):::iri 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":negativeEvidence"-->  e0v2
    e0v1("?locannot"):::projected 
    e0v2("?locev"):::projected 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> v2
  v1 --":negativeEvidence"-->  v2
  v3 --":isoform"-->  v4
  v4 --":cellularComponent"-->  v1
  v1 --":term"-->  v5
  v5 --"rdfs:label"-->  v6
  v1 --":evidence"-->  v2
  v2 --":quality"-->  c8
  bind2[/"str(?loclab)"/]
  v6 --o bind2
  bind2 --as--o v7