neXtProt/NXQ_00244

Proteins with a variant having an impact on a binary interaction

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry ?interactant WHERE {
 ?entry :isoform / :proteoform / :phenotypicVariation ?phvar .
 ?phvar :term / :childOf nextprot_cv:ME_0000002 . # children of impact
 ?phvar :evidence / :quality :GOLD .
 ?phvar :impactedObject / :interactant ?interactant.
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  v3("?interactant"):::projected 
  v2("?phvar")
  a1((" "))
  a2((" "))
  a3((" "))
  a4((" "))
  a5((" "))
  c9([":GOLD"]):::iri 
  c6([":terminology/ME_0000002"]):::iri 
  v1 --":isoform"-->  a1
  a1 --":proteoform"-->  a2
  a2 --":phenotypicVariation"-->  v2
  v2 --":term"-->  a3
  a3 --":childOf"-->  c6
  v2 --":evidence"-->  a4
  a4 --":quality"-->  c9
  v2 --":impactedObject"-->  a5
  a5 --":interactant"-->  v3