A set of SPARQL examples that are used in different SIB resources
Proteins that act as transporters and their TCDB numbers
PREFIX : <http://nextprot.org/rdf/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
SELECT DISTINCT ?entry (str(?trcom) as ?trannot) (str(?acc) as ?trac) {
?entry :isoform/ :transportActivity ?tr.
?tr rdfs:comment ?trcom; :evidence / :reference ?ref.
?ref a :Xref; :accession ?acc .
} order by ?acc
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v1("?acc"):::projected
v2("?entry"):::projected
v5("?ref")
v3("?tr")
v7("?trac")
v6("?trannot")
v4("?trcom"):::projected
a1((" "))
a2((" "))
c7([":Xref"]):::iri
v2 --":isoform"--> a1
a1 --":transportActivity"--> v3
v3 --"rdfs:comment"--> v4
v3 --":evidence"--> a2
a2 --":reference"--> v5
v5 --"a"--> c7
v5 --":accession"--> v1
bind0[/"str(?trcom)"/]
v4 --o bind0
bind0 --as--o v6
bind1[/"str(?acc)"/]
v1 --o bind1
bind1 --as--o v7