sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_00261

Glycosylation sites from GlyConnect

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX source: <http://nextprot.org/rdf/source/>

SELECT DISTINCT ?entry ?iso ?pos ?comment WHERE {
?entry :isoform ?iso.
?iso :swissprotDisplayed true .
?iso :glycosylationSite ?glyco.
?glyco :evidence / :assignedBy source:GlyConnect.
?glyco rdfs:comment ?comment.
?glyco :start ?pos.

} order by ?entry
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v4("?comment"):::projected 
  v1("?entry"):::projected 
  v3("?glyco")
  v2("?iso"):::projected 
  v5("?pos"):::projected 
  a1((" "))
  c3(["true^^xsd:boolean"]):::literal 
  c7([":source/GlyConnect"]):::iri 
  v1 --":isoform"-->  v2
  v2 --":swissprotDisplayed"-->  c3
  v2 --":glycosylationSite"-->  v3
  v3 --":evidence"-->  a1
  a1 --":assignedBy"-->  c7
  v3 --"rdfs:comment"-->  v4
  v3 --":start"-->  v5