A set of SPARQL examples that are used in different SIB resources
Proteins with interactions obtained from x-ray crystallography
PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>
SELECT DISTINCT ?entry WHERE {
?entry :isoform ?iso.
?iso :binaryInteraction /:evidence ?ev.
?ev :interactionDetectionMethod nextprot_cv:MI_0114. # x-ray crystallography
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v1("?entry"):::projected
v3("?ev")
v2("?iso")
a1((" "))
c5([":terminology/MI_0114"]):::iri
v1 --":isoform"--> v2
v2 --":binaryInteraction"--> a1
a1 --":evidence"--> v3
v3 --":interactionDetectionMethod"--> c5