A set of SPARQL examples that are used in different SIB resources
Pathways in which SCN1A GOLD interactants are involved
PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot: <http://nextprot.org/rdf/entry/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
SELECT DISTINCT ?pathway WHERE {
nextprot:NX_P35498 :isoform /:binaryInteraction ?interaction.
?interaction :interactant ?entry; :quality :GOLD.
?entry a :Entry.
?entry :isoform /:pathway /rdfs:comment ?pathway.
}
order by asc(?pathway)
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v3("?entry")
v2("?interaction")
v1("?pathway"):::projected
a1((" "))
a2((" "))
a3((" "))
c6([":GOLD"]):::iri
c8([":Entry"]):::iri
c1([":entry/NX_P35498"]):::iri
c1 --":isoform"--> a1
a1 --":binaryInteraction"--> v2
v2 --":interactant"--> v3
v2 --":quality"--> c6
v3 --"a"--> c8
v3 --":isoform"--> a2
a2 --":pathway"--> a3
a3 --"rdfs:comment"--> v1