sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_00301

PE1 entries that comply with HPP guidelines (at least 2 non overlapping peptides of at least 9aa from a single data source)

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 ?entry :existence :Evidence_at_protein_level .
 ?entry :isoform / :uniprotKeyword / :term nextprot_cv:KW-1267.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  a1((" "))
  a2((" "))
  c2([":Evidence_at_protein_level"]):::iri 
  c6([":terminology/KW-1267"]):::iri 
  v1 --":existence"-->  c2
  v1 --":isoform"-->  a1
  a1 --":uniprotKeyword"-->  a2
  a2 --":term"-->  c6