neXtProt/NXQ_00302

PE1 entries that do not comply with HPP guidelines (at least 2 non overlapping peptides of at least 9aa from a single data source)

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 ?entry :existence :Evidence_at_protein_level .
 ?entry :isoform ?iso.
 filter not exists { ?iso :uniprotKeyword / :term nextprot_cv:KW-1267.}
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v1("?iso")
  a1((" "))
  c5([":Evidence_at_protein_level"]):::iri 
  c3([":terminology/KW-1267"]):::iri 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":uniprotKeyword"-->  e0a1
    e0a1 --":term"-->  e0c3
    e0v1("?iso"):::projected 
    e0a1((" ")):::projected 
    e0c3([":terminology/KW-1267"]):::iri 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> a1
  f0 --> c2
  f0 --> c3
  v1 --":uniprotKeyword"-->  a1
  a1 --":term"-->  c3
  v2 --":existence"-->  c5
  v2 --":isoform"-->  v1