neXtProt/NXQ_09087

Check there are no entries with variant annotations with evidence NOT from Cellosaurus, Cosmic, dbSNP, gnomAD, neXtProt or UniProt

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>

select distinct ?entry ?src where {
  ?entry :isoform ?iso.
  ?iso :variant /:evidence /:assignedBy ?src.
  filter ( ?src not in (source:Cellosaurus,source:Cosmic,source:dbSNP,source:gnomAD,source:NextProt,source:Uniprot))
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v3("?iso")
  v1("?src"):::projected 
  a1((" "))
  a2((" "))
  f0[["?src != ':source/Cellosaurus'?src != ':source/Cosmic'?src != ':source/dbSNP'?src != ':source/gnomAD'?src != ':source/NextProt'?src != ':source/Uniprot'"]]
  f0 --> v1
  v2 --":isoform"-->  v3
  v3 --":variant"-->  a1
  a1 --":evidence"-->  a2
  a2 --":assignedBy"-->  v1