A set of SPARQL examples that are used in different SIB resources
Check there are no entries with PTM information annotations with evidence from Uniprot of quality SILVER
PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>
select distinct ?entry where {
?entry :isoform /:ptmInfo /:evidence ?ev1.
?ev1 :assignedBy source:Uniprot.
?ev1 :quality :SILVER.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v1("?entry"):::projected
v2("?ev1")
a1((" "))
a2((" "))
c7([":SILVER"]):::iri
c5([":source/Uniprot"]):::iri
v1 --":isoform"--> a1
a1 --":ptmInfo"--> a2
a2 --":evidence"--> v2
v2 --":assignedBy"--> c5
v2 --":quality"--> c7