NXQ_09342

rq turtle/ttl

• QC
• evidence
• negative
• sequence

Check there are no entries with initiator methionine annotations with evidence from UniProt that is negative

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>

select distinct ?entry where {
  ?entry :isoform /:initiatorMethionine /:evidence ?ev.
  ?ev :assignedBy source:Uniprot.
  ?ev :negative 1.
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  v2("?ev")
  a1((" "))
  a2((" "))
  c7(["1^^xsd:integer"]):::literal 
  c5([":source/Uniprot"]):::iri 
  v1 --":isoform"-->  a1
  a1 --":initiatorMethionine"-->  a2
  a2 --":evidence"-->  v2
  v2 --":assignedBy"-->  c5
  v2 --":negative"-->  c7