sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_09413

Check there are no entries whose gene is located on chromosome unknown which does not have AC NX_O00370 NX_Q96PT3 NX_Q96PT4 NX_Q9UN81

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX entry: <http://nextprot.org/rdf/entry/>

select distinct ?entry where {
  ?entry :gene  ?gene .
  ?gene :chromosome "unknown"^^xsd:string .
  filter (?entry not in (entry:NX_O00370,entry:NX_Q96PT3,entry:NX_Q96PT4,entry:NX_Q9UN81))
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  v2("?gene")
  c7(["unknown"]):::literal 
  f0[["?entry != ':entry/NX_O00370'?entry != ':entry/NX_Q96PT3'?entry != ':entry/NX_Q96PT4'?entry != ':entry/NX_Q9UN81'"]]
  f0 --> v1
  v1 --":gene"-->  v2
  v2 --":chromosome"-->  c7