sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_09415

Check there are no entries whose gene is located on chromosome "unknown" which have a band

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>

select distinct ?entry where {
  ?entry :gene  ?gene .
  ?gene :chromosome "unknown"^^xsd:string .
  filter not exists {?gene :band ?_ }
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?_")
  v3("?entry"):::projected 
  v1("?gene")
  c4(["unknown"]):::literal 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":band"-->  e0v2
    e0v2("?_"):::projected 
    e0v1("?gene"):::projected 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> v2
  v1 --":band"-->  v2
  v3 --":gene"-->  v1
  v1 --":chromosome"-->  c4