sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

neXtProt/NXQ_09431

Check there are no entries with a gene name which does not contain a capital letter or is not "unknown"

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>

select distinct ?entry ?name where {
  ?entry :gene / :name / rdfs:label ?name .
   filter (!regex (?name,'[A-Z]'))
   filter (!regex (?name,'unknown'))
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v1("?name"):::projected 
  a1((" "))
  a2((" "))
  f0[["not regex(?name,'unknown')"]]
  f0 --> v1
  f1[["not regex(?name,'#91;A-Z#93;')"]]
  f1 --> v1
  v2 --":gene"-->  a1
  a1 --":name"-->  a2
  a2 --"rdfs:label"-->  v1