neXtProt/NXQ_09435

Check there are no entries with an xref to PDBsum and no PDB mapping annotation

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX db: <http://nextprot.org/rdf/db/>

select distinct ?entry where {
  ?entry :reference /:provenance db:PDBsum.
  filter not exists {?entry :isoform /:pdbMapping ?map.}
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v1("?entry"):::projected 
  v2("?map")
  a2((" "))
  a1((" "))
  c5([":db/PDBsum"]):::iri 
  f0[["not  "]]
  subgraph f0e0["Exists Clause"]
    e0v1 --":isoform"-->  e0a1
    e0a1 --":pdbMapping"-->  e0v2
    e0v1("?entry"):::projected 
    e0v2("?map"):::projected 
    e0a1((" ")):::projected 
  end
  f0--EXISTS--> f0e0
  f0 --> v1
  f0 --> c1
  f0 --> a1
  f0 --> c2
  f0 --> v2
  v1 --":isoform"-->  a1
  a1 --":pdbMapping"-->  v2
  v1 --":reference"-->  a2
  a2 --":provenance"-->  c5