sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

NXQ_09444

rq turtle/ttl

Check there are no entries with a keyword in the category "Technical term" that does not apply to human proteins

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>

select distinct ?entry where {  # Include ?kw if result is not 0 to identify problem keyword
  values ?kw {
  cv:KW-0181 # Complete proteome
  cv:KW-0952 # Extinct organism protein
  cv:KW-0308 # Genetically modified food
  cv:KW-0374 # Hybridoma
  cv:KW-0614 # Plasmid
  cv:KW-1185 # Reference proteome
  }
  ?entry :isoform /:keyword /:term ?kw.
}
:isoform
:keyword
:term
?entry
?kw
VALUES ?kw
:terminology/KW-0181
:terminology/KW-0952
:terminology/KW-0308
:terminology/KW-0374
:terminology/KW-0614
:terminology/KW-1185