NXQ_09444

rq turtle/ttl

• QC
• keyword

Check there are no entries with a keyword in the category "Technical term" that does not apply to human proteins

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>

select distinct ?entry where {  # Include ?kw if result is not 0 to identify problem keyword
  values ?kw {
  cv:KW-0181 # Complete proteome
  cv:KW-0952 # Extinct organism protein
  cv:KW-0308 # Genetically modified food
  cv:KW-0374 # Hybridoma
  cv:KW-0614 # Plasmid
  cv:KW-1185 # Reference proteome
  }
  ?entry :isoform /:keyword /:term ?kw.
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v1("?kw")
  a1((" "))
  a2((" "))
  bind0[/VALUES ?kw/]
  bind0-->v1
  bind00([":terminology/KW-0181"])
  bind00 --> bind0
  bind01([":terminology/KW-0952"])
  bind01 --> bind0
  bind02([":terminology/KW-0308"])
  bind02 --> bind0
  bind03([":terminology/KW-0374"])
  bind03 --> bind0
  bind04([":terminology/KW-0614"])
  bind04 --> bind0
  bind05([":terminology/KW-1185"])
  bind05 --> bind0
  v2 --":isoform"-->  a1
  a1 --":keyword"-->  a2
  a2 --":term"-->  v1