A set of SPARQL examples that are used in different SIB resources
Check there are no entries with keywords corresponding to keyword categories
PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
select distinct ?entry where { # Include ?kw if result is not 0 to identify problem keyword
values ?kw {
cv:KW-9999 # Biological process
cv:KW-9998 # Cellular component
cv:KW-9997 # Coding sequence diversity
cv:KW-9996 # Developmental stage
cv:KW-9995 # Disease
cv:KW-9994 # Domain
cv:KW-9993 # Ligand
cv:KW-9992 # Molecular function
cv:KW-9991 # PTM
cv:KW-9990 # Technical term
}
?entry :isoform /:keyword /:term ?kw.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?entry"):::projected
v1("?kw")
a1((" "))
a2((" "))
bind0[/VALUES ?kw/]
bind0-->v1
bind00([":terminology/KW-9999"])
bind00 --> bind0
bind01([":terminology/KW-9998"])
bind01 --> bind0
bind02([":terminology/KW-9997"])
bind02 --> bind0
bind03([":terminology/KW-9996"])
bind03 --> bind0
bind04([":terminology/KW-9995"])
bind04 --> bind0
bind05([":terminology/KW-9994"])
bind05 --> bind0
bind06([":terminology/KW-9993"])
bind06 --> bind0
bind07([":terminology/KW-9992"])
bind07 --> bind0
bind08([":terminology/KW-9991"])
bind08 --> bind0
bind09([":terminology/KW-9990"])
bind09 --> bind0
v2 --":isoform"--> a1
a1 --":keyword"--> a2
a2 --":term"--> v1