sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

NXQ_09448

rq turtle/ttl

Check there are no entries with a keyword in the category "Coding sequence diversity" that does not apply to human proteins

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>

select distinct ?entry where {  # Include ?kw if result is not 0 to identify problem keyword
  values ?kw {
  cv:KW-0669 # Pyrrolysine
  cv:KW-1197 # Ribosomal skipping
  cv:KW-1159 # RNA suppression of termination
  cv:KW-1158 # RNA termination-reinitiation
  cv:KW-1156 # RNA translational shunting
  }
  ?entry :isoform /:keyword /:term ?kw.
}
:isoform
:keyword
:term
?entry
?kw
VALUES ?kw
:terminology/KW-0669
:terminology/KW-1197
:terminology/KW-1159
:terminology/KW-1158
:terminology/KW-1156