A set of SPARQL examples that are used in different SIB resources
Check there are no entries with a keyword in the category "Disease" that does not apply to human proteins
PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
select distinct ?entry where { # Include ?kw if result is not 0 to identify problem keyword
values ?kw {
cv:KW-0014 # AIDS
cv:KW-0192 # Crown gall tumor
cv:KW-0214 # Dental caries
cv:KW-0461 # Malaria
cv:KW-0821 # Trypanosomiasis
cv:KW-0855 # Whooping cough
}
?entry :isoform /:keyword /:term ?kw.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?entry"):::projected
v1("?kw")
a1((" "))
a2((" "))
bind0[/VALUES ?kw/]
bind0-->v1
bind00([":terminology/KW-0014"])
bind00 --> bind0
bind01([":terminology/KW-0192"])
bind01 --> bind0
bind02([":terminology/KW-0214"])
bind02 --> bind0
bind03([":terminology/KW-0461"])
bind03 --> bind0
bind04([":terminology/KW-0821"])
bind04 --> bind0
bind05([":terminology/KW-0855"])
bind05 --> bind0
v2 --":isoform"--> a1
a1 --":keyword"--> a2
a2 --":term"--> v1